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by sennoma 2009-12-24 15:40 machinereadabledata · opendata
http://electronicmuseum.org.uk/2009/07/13/pushing-mrd-out-from-under-the-geek-rock - cached - mail it - history
Simon Hodson of JISC examines how technology and funding policies have changed the ways that researchers share data
by sennoma 2009-12-13 13:15 opendata
http://www.researchinformation.info/features/feature.php?feature_id=243 - cached - mail it - history
As digital technologies are expanding the power and reach of research, they are also raising complex issues. These include complications in ensuring the validity of research data; standards that do not keep pace with the high rate of innovation; restrictions on data sharing that reduce the ability of researchers to verify results and build on previous research; and huge increases in the amount of data being generated, creating severe challenges in preserving that data for long-term use. Ensuring the Integrity, Accessibility, and Stewardship of Research Data in the Digital Age examines the consequences of the changes affecting research data with respect to three issues - integrity, accessibility, and stewardship-and finds a need for a new approach to the design and the management of research projects. The report recommends that all researchers receive appropriate training in the management of research data, and calls on researchers to make all research data, methods, and other information underlying results publicly accessible in a timely manner. The book also sees the stewardship of research data as a critical long-term task for the research enterprise and its stakeholders. Individual researchers, research institutions, research sponsors, professional societies, and journals involved in scientific, engineering, and medical research will find this book an essential guide to the principles affecting research data in the digital age.
by sennoma 2009-11-27 20:07 opendata · oaos.review
http://www.nap.edu/catalog.php?record_id=12615 - cached - mail it - history
OA data: recent discussion and announcements
by sennoma 2009-11-27 13:01 opendata
http://www.earlham.edu/~peters/fos/2009/11/oa-data-recent-discussion-and_25.html?utm_source=feedburner&utm_medium=feed&u... - cached - mail it - history
Increasingly, scientific breakthroughs will be powered by advanced computing capabilities that help researchers manipulate and explore massive datasets. The speed at which any given scientific discipline advances will depend on how well its researchers collaborate with one another, and with technologists, in areas of eScience such as databases, workflow management, visualization, and cloud computing technologies. In The Fourth Paradigm: Data-Intensive Scientific Discovery, the collection of essays expands on the vision of pioneering computer scientist Jim Gray for a new, fourth paradigm of discovery based on data-intensive science and offers insights into how it can be fully realized.
by sennoma 2009-10-24 12:08 opendata · openscience
http://research.microsoft.com/en-us/collaboration/fourthparadigm - cached - mail it - history
BioTorrents is a website that allows open access sharing of scientific data. It uses the popular BitTorrent peer-to-peer file sharing technology to allow rapid file transferring.
by sennoma 2009-10-23 01:35 opendata · oaos.misc
http://betascience.blogspot.com/2009/10/biotorrents-file-sharing-resource-for.html - cached - mail it - history
Mission: • To inspire new activities and facilitate knowledge exchange between Nordic/Baltic • stakeholder, and to increase the international visibility of Nordic and Baltic policies and initiatives • To stress the importance of Open Access in the Nordic and Baltic countries and to describe both theoretical and best-practice models for financing, rights management and other fundamental issues. • To disseminate to both a Nordic/Baltic and an international readership information about successful initiatives and other activities in the Nordic and Baltic countries.
by sennoma 2009-10-20 12:41 oa · opendata · openscience · oaos.misc
http://www.sciecom.org/sciecominfo/ - cached - mail it - history
by sennoma 2009-09-27 20:23 opendata · openscience · scienceisasnakepit · scholarlycommunication
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007078 - cached - mail it - history
Doesn’t peer review offer some guarantee of quality?, suggests Harford. “Peer review is of minimal value” is the response to this, “…checkability is what really guarantees quality”. Senn goes on to suggest that scientists sign an undertaking to provide raw original data to anyone who requests it.
by sennoma 2009-09-12 10:19 peerreview · opendata
http://blog.fuzzierlogic.com/?p=278 - cached - mail it - history
Sharing data is good. But sharing your own data? That can get complicated. As two research communities who held meetings in May on the issue report their proposals to promote data sharing in biology, a special issue of Nature examines the cultural and technical hurdles that can get in the way of good intentions.
by sennoma 2009-09-10 01:39 opendata · openscience
http://www.nature.com/news/specials/datasharing/index.html - cached - mail it - history
by sennoma 2009-08-20 23:53 opendata · oaos.tools
http://www.icdp-online.org/contenido/std-doi/front_content.php - cached - mail it - history
Publication and Citation of Scientific Primary Data" (STD-DOI) is a project funded by the German Science Foundation. Its aim is to make primary scientific data citeable as publications. In this system, a data set would be attributed to its investigators as authors like it would be done for a work in the conventional scientific literature. Thus, scientific primary data should not exclusively understood as part of a scientific publication, but may have its own identity
by sennoma 2009-07-21 00:14 opendata · semanticweb
http://www.std-doi.de/front_content.php - cached - mail it - history
by sennoma 2009-07-04 15:54 JISC · Berglund · IR · opendata
http://www.disc-uk.org - cached - mail it - history
The Science Collaboration Framework (SCF) is a software toolkit to establish web-based virtual team organizations for researchers in biomedicine. It enables researchers to publish and discuss on-line content such as articles, news, and perspectives, and to provide shared semantic context for this content using established scientific vocabularies and automated text mining.
by sennoma 2009-06-23 01:44 opendata · openscience · collaboration · semanticweb
http://sciencecollaboration.org - cached - mail it - history
by sennoma 2009-06-22 05:38 opendata · ehealth · patientadvocacy
http://www.slideboom.com/presentations/73871/e-Patient-Dave%27s-presentation-to-NeHC-board-June-2-2009 - cached - mail it - history
Each day nonprofits worldwide produce insightful and valuable research on complex social issues. IssueLab makes it easy to locate, access, and engage with this extensive and diverse body of knowledge.
by sennoma 2009-06-18 00:42 opendata
http://www.issuelab.org - cached - mail it - history
by sennoma 2009-06-08 17:16 opendata · mikethemadbiologist
http://scienceblogs.com/mikethemadbiologist/2009/06/the_double_standard_of_genomic.php - cached - mail it - history
by sennoma 2009-06-04 15:41 oaos.talks · dorotheasalo · opendata · IR
http://www.slideshare.net/cavlec/save-the-cows-data-curation-for-the-rest-of-us-1533252 - cached - mail it - history
by sennoma 2009-06-02 17:45 opendata · openlicensing · egonwillighagen
http://chem-bla-ics.blogspot.com/2009/05/open-data-license-rights-aggregation.html - cached - mail it - history
by sennoma 2009-05-30 18:44 webtools · opendata · open.govt
http://dataferrett.census.gov - cached - mail it - history
RDF, The Semantic Web, and Linked Data This essay is an attempt to tie together my articles and blog posts on semantic web related topics. Bob DuCharme, last updated 22 May 2009
by sennoma 2009-05-28 12:57 linked_data · opendata · semanticweb · rdf
http://www.snee.com/rdf/semweboverview.html - cached - mail it - history
# We should create an open central repository location at which authors can release software and documentation. # Software release should be an integral and funded part of projects. # Software release should become an integral part of the publication process. # The barriers to publication of methods and descriptive papers should be lower. # Programming, statistics and data analysis should be an integral part of the curriculum. # There should be more opportunities to fund grass-roots software projects of use to the wider community. # We should develop institutional support for science programs that attract and support talented scientists who generate software for public release.
by sennoma 2009-05-26 13:55 opendata · openscience
http://www.openscience.org/blog/?p=270 - cached - mail it - history
by sennoma 2009-05-21 15:09 opendata · govt data
http://www.data.gov - cached - mail it - history
it appears likely that if and when more and more scientists choose to make their raw data public after publication (and those that don't therefore become increasingly subject to suspicion by their peers), a fraud case like that of Jan Hendrik Schön will become quite impossible at some point in the future.
by sennoma 2009-05-18 16:10 opendata
http://latticeqcd.blogspot.com/2009/05/openness-fraud.html - cached - mail it - history
Experimental processes in the life sciences are becoming increasingly complex. As a result, recording, archiving and sharing descriptions of these processes and of the results of experiments is becoming ever more challenging. However, validation of results, sharing of best practice and integrated analysis all require systematic description of experiments at carefully determined levels of detail. The present paper discusses issues associated with the management of experimental data in the life sciences, including: the different tasks that experimental data and metadata can support, the role of standards in informing data sharing and archiving, and the development of effective databases and tools, building on these standards.
by sennoma 2009-05-18 10:56 opendata · openscience · collaboration
http://www.biochemsoctrans.org/bst/036/bst0360033.htm - cached - mail it - history
microformats and RDF with Google = structured data on blogs; nice
by sennoma 2009-05-16 11:51 semanticweb · opendata · microformats · google
http://google.com/support/webmasters/bin/answer.py?hl=en&answer=99170 - cached - mail it - history
Will government data be the proof-of-principle needed to get researchers to see value in linked open data/semantic web?
by sennoma 2009-05-15 11:27 opendata
http://georeading.posterous.com/city-of-vancouver-proposal-to-support-open-da - cached - mail it - history
The "Open Data Grid" (ODG) is an open distributed storage grid for open data based on Allmydata's open-source "Tahoe" system. It is being coordinated by the Open Knowledge Foundation and anyone can participate: * A few Gigabytes to spare on a server? Why not run a storage node – instructions below. * Got open data you want to store safely? Put it on the grid – instructions below.
by sennoma 2009-05-13 09:13 opendata
http://grid.okfn.org - cached - mail it - history
by sennoma 2009-05-13 08:58 oaos.examples · opendata · collaboration
http://www.nature.com/embor/journal/v10/n5/full/embor200979.html - cached - mail it - history
by sennoma 2009-05-13 08:55 opendata
http://lucidtechnics.blogspot.com/2009/05/open-data.html - cached - mail it - history
EMBL - the European Molecular Biology Laboratory, has made part of their SIDER Side Effect Resource available to the public free of restriction via CC0, placing it in the public domain. The database, SIDER, contains information on marketed medicines and their recorded adverse side effects and drug reactions. Included in this dataset is information on the frequency of these drug reactions, other drug and side effect classifications as well as links to other relevant resources. To date, 888 drugs are listed in the database, a tremendous resource for research and drug discovery. The mapping of labels and euphoria-related side effects are now public domain, with some other side effect information available for download under a CC-BY-NC-SA license.
by sennoma 2009-05-12 08:24 opendata · creativecommons · cczero
http://sciencecommons.org/weblog/archives/2009/05/07/embl-data-cc0 - cached - mail it - history
by sennoma 2009-05-12 08:22 oa · openscience · reproducibleresearch · opendata
http://softwarecarpentry.wordpress.com/2009/05/11/links-for-summer-interns - cached - mail it - history
by sennoma 2009-05-12 08:21 oa · openscience · reproducibleresearch · opendata
http://softwarecarpentry.wordpress.com - cached - mail it - history
by sennoma 2009-05-09 04:18 intellectualproperty · opendata · assholes
http://www.law.com/jsp/iplawandbusiness/PubArticleIPLB.jsp?id=1202430332016 - cached - mail it - history
by sennoma 2009-04-30 06:23 opendata
http://blog.okfn.org/2009/04/30/open-data-commons-release-v10-release-candidate-for-open-database-license/ - cached - mail it - history
by sennoma 2009-04-29 16:37 opendata
http://openanalysis.wordpress.com/ - cached - mail it - history
by sennoma 2009-04-26 20:49 opendata
http://darwin.zoology.gla.ac.uk/~rpage/flu/ - cached - mail it - history
by sennoma 2009-04-25 06:11 opendata
http://peanutbutter.wordpress.com/2009/04/25/the-semantic-web-of-life-science/ - cached - mail it - history
by sennoma 2009-04-24 20:36 opendata
http://blog.patientslikeme.com/2009/04/08/announcing-the-patientslikeme-als-genetics-search-engine/ - cached - mail it - history
by sennoma 2009-04-23 18:44 opendata
http://aws.typepad.com/aws/2008/12/paging-researchers-analysts-and-developers.html - cached - mail it - history
by sennoma 2009-04-21 03:39 opendata
http://www.slideshare.net/CameronNeylon/in-your-worst-nightmares-provenance-1314757 - cached - mail it - history
by sennoma 2009-04-14 22:11 opendata
http://mith.umd.edu/tools/?page_id=60 - cached - mail it - history
by sennoma 2009-04-14 00:53 opendata
http://blog.sunlightfoundation.com/2009/04/13/opensecrets-goes-opendata/ - cached - mail it - history
by sennoma 2009-04-13 18:02 opendata
http://www.noahbrier.com/archives/2009/04/open_data_and_the_future_of_business_vol_1.php - cached - mail it - history
by sennoma 2009-04-13 18:02 opendata
http://psdblog.worldbank.org/psdblog/2009/04/world-bankoecd-beat-us-government-10.html - cached - mail it - history
Campaign finance clearinghouse OpenSecrets.org, which is run by the nonpartisan Center for Responsive Politics, is going "open data"
by sennoma 2009-04-10 07:57 opendata
http://opendotdotdot.blogspot.com/2009/04/opensecrets-moves-to-open-data-model.html - cached - mail it - history
by sennoma 2009-04-08 21:07 opendata
http://www.earlham.edu/~peters/fos/2009/04/free-hosting-for-open-data.html - cached - mail it - history
by sennoma 2009-04-08 21:03 opendata
http://open.helicosbio.com/mwiki/index.php/Main_Page - cached - mail it - history
This issue of centralization marks how our group diverges with other transparency advocates. For example, the transparency advocacy group OMB Watch explicitly called for a “Centralized Reporting System” (page 9 of this report). [UPDATED WITH CLARIFICATION SEE BELOW]. While in some ways convenient, centralization is not required, and in, our view, works against transparency. First off, feeds can be readily aggregated. With feeds, the disclosure reports of distributed agencies can be brought together for convenience and “one stop shopping” monitoring. Secondly, the call for a centralized reporting source means that all the data gathering and reporting processes happen behind the scenes in a manner that is not publicly visible. What’s happening in these back-end processes? How is the data being managed and processed? How is it transformed? You end up with “black-box transparency” which is obviously an oxymoron. But this gets to the heart of the issue. Transparency advocacy groups need to be much more aware of the architecture issues behind “transparency”. Access to data is not enough. The processes behind how the data is gathered, processed, and published also matter.
by sennoma 2009-04-08 20:30 opendata
http://www.alexandriaarchive.org/blog/?p=207 - cached - mail it - history
by sennoma 2009-04-04 04:57 opendata
http://researchremix.wordpress.com/2008/04/10/why-study-data-sharing-why-share-your-data/?referer=sphere_related_content... - cached - mail it - history
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